Prof. Dr. Henner Simianer

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  • 2023 | Journal Article | 
    ​ ​How economic weights translate into genetic and phenotypic progress, and vice versa​
    Simianer, H. ; Heise, J.; Rensing, S.; Pook, T.; Geibel, J. & Reimer, C.​ (2023) 
    Genetics Selection Evolution, 55(1) art. 38​.​ DOI: https://doi.org/10.1186/s12711-023-00807-0 
    ​Details  DOI 
  • 2022 | Journal Article | Research Paper | 
    ​ ​Epigenetic Regulation of Phenotypic Sexual Plasticity Inducing Skewed Sex Ratio in Zebrafish​
    Hosseini, S. ; Trakooljul, N.; Hirschfeld, M.; Wimmers, K.; Simianer, H. ; Tetens, J.   & Sharifi, A. R.  et al.​ (2022) 
    Frontiers in Cell and Developmental Biology, 10.​ DOI: https://doi.org/10.3389/fcell.2022.880779 
    ​Details  DOI 
  • 2022 | Journal Article | 
    ​ ​learnMET: an R package to apply machine learning methods for genomic prediction using multi-environment trial data​
    Westhues, C. C.; Simianer, H.   & Beissinger, T. M. ​ (2022) 
    G3 Genes|Genomes|Genetics, art. jkac226​.​ DOI: https://doi.org/10.1093/g3journal/jkac226 
    ​Details  DOI 
  • 2021 | Journal Article
    ​ ​A unifying concept of animal breeding programmes​
    Simianer, H. ; Büttgen, L.; Ganesan, A.; Ha, N. T. & Pook, T.​ (2021) 
    Journal of Animal Breeding and Genetics, 138(2) pp. 137​-150​.​ DOI: https://doi.org/10.1111/jbg.12534 
    ​Details  DOI 
  • 2021 | Journal Article
    ​ ​The Modular Breeding Program Simulator (MoBPS) allows efficient simulation of complex breeding programs​
    Pook, T.; Reimer, C.; Freudenberg, A.; Büttgen, L.; Geibel, J. ; Ganesan, A. & Ha, N.-T. et al.​ (2021) 
    Animal Production Science,.​ DOI: https://doi.org/10.1071/AN21076 
    ​Details  DOI 
  • 2021 | Journal Article
    ​ ​Harvest Moon: Some personal thoughts on past and future directions in animal breeding research​
    Simianer, H. ​ (2021) 
    Journal of Animal Breeding and Genetics, 138(2) pp. 135​-136​.​ DOI: https://doi.org/10.1111/jbg.12538 
    ​Details  DOI 
  • 2021 | Journal Article | Research Paper | 
    ​ ​In Silico Prediction of Transcription Factor Collaborations Underlying Phenotypic Sexual Dimorphism in Zebrafish (Danio rerio)​
    Hosseini, S. ; Schmitt, A. O. ; Tetens, J. ; Brenig, B. ; Simianer, H. ; Sharifi, A. R.   & Gültas, M.​ (2021) 
    Genes, 12(6) pp. 873​.​ DOI: https://doi.org/10.3390/genes12060873 
    ​Details  DOI 
  • 2021 | Journal Article | Research Paper | 
    ​ ​Genotypic and Dietary Effects on Egg Quality of Local Chicken Breeds and Their Crosses Fed with Faba Beans​
    Nolte, T.; Jansen, S.; Weigend, S.; Halle, I.; Simianer, H. ; Sharifi, A. R.   & Mörlein, D. ​ (2021) 
    Animals, 11(7) pp. 1947​.​ DOI: https://doi.org/10.3390/ani11071947 
    ​Details  DOI 
  • 2020 | Journal Article
    ​ ​Improving Imputation Quality in BEAGLE for Crop and Livestock Data​
    Pook, T.; Mayer, M.; Geibel, J. ; Weigend, S.; Cavero, D.; Schoen, C. C. & Simianer, H. ​ (2020) 
    G3: Genes, Genomes, Genetics, 10(1) pp. 177​-188​.​ DOI: https://doi.org/10.1534/g3.119.400798 
    ​Details  DOI 
  • 2020 | Journal Article
    ​ ​MoBPS - Modular Breeding Program Simulator​
    Pook, T.; Schlather, M. & Simianer, H. ​ (2020) 
    G3: Genes, Genomes, Genetics, 10(6) pp. 1915​-1918​.​ DOI: https://doi.org/10.1534/g3.120.401193 
    ​Details  DOI 
  • 2020 | Journal Article
    ​ ​Welcome to the machine: Terms, topics and trends​
    Oertel, E.   & Simianer, H. ​ (2020) 
    Journal of Animal Breeding and Genetics, 137(6) pp. 521​-522​.​ DOI: https://doi.org/10.1111/jbg.12511 
    ​Details  DOI 
  • 2020 | Journal Article
    ​ ​ANOVA-HD: Analysis of variance when both input and output layers are high-dimensional​
    de los Campos, G.; Pook, T.; Gonzalez-Reymundez, A.; Simianer, H. ; Mias, G. & Vazquez, A. I.​ (2020) 
    PLoS One, 15(12) pp. e0243251​.​ DOI: https://doi.org/10.1371/journal.pone.0243251 
    ​Details  DOI 
  • 2020 | Journal Article
    ​ ​Pan-genomic open reading frames: A potential supplement of single nucleotide polymorphisms in estimation of heritability and genomic prediction​
    Li, Z. & Simianer, H. ​ (2020) 
    PLoS Genetics, 16(8) pp. e1008995​.​ DOI: https://doi.org/10.1371/journal.pgen.1008995 
    ​Details  DOI 
  • 2020 | Journal Article
    ​ ​Phantom Epistasis in Genomic Selection: On the Predictive Ability of Epistatic Models​
    Schrauf, M. F; Martini, J. W R; Simianer, H. ; de los Campos, G.; Cantet, R.; Freudenthal, J. & Korte, A. et al.​ (2020) 
    G3 Genes|Genomes|Genetics, 10(9) pp. 3137​-3145​.​ DOI: https://doi.org/10.1534/g3.120.401300 
    ​Details  DOI 
  • 2020 | Journal Article | Research Paper | 
    ​ ​Assessing breed integrity of Göttingen Minipigs​
    Reimer, C.; Ha, N.-T.; Sharifi, A. R. ; Geibel, J. ; Mikkelsen, L. F.; Schlather, M. & Weigend, S. et al.​ (2020) 
    BMC Genomics, 21(1) art. 308​.​ DOI: https://doi.org/10.1186/s12864-020-6590-4 
    ​Details  DOI 
  • 2020 | Journal Article | 
    ​ ​Using Local Convolutional Neural Networks for Genomic Prediction​
    Pook, T.; Freudenthal, J.; Korte, A. & Simianer, H. ​ (2020) 
    Frontiers in Genetics, 11.​ DOI: https://doi.org/10.3389/fgene.2020.561497 
    ​Details  DOI 
  • 2020 | Journal Article | 
    ​ ​Relationship between Bone Stability and Egg Production in Genetically Divergent Chicken Layer Lines​
    Jansen, S.; Baulain, U.; Habig, C.; Weigend, A.; Halle, I.; Scholz, A. M. & Simianer, H.  et al.​ (2020) 
    Animals, 10(5) pp. 850​.​ DOI: https://doi.org/10.3390/ani10050850 
    ​Details  DOI 
  • 2020 | Journal Article | 
    ​ ​Egg Production and Bone Stability of Local Chicken Breeds and Their Crosses Fed with Faba Beans​
    Nolte, T.; Jansen, S.; Halle, I.; Scholz, A. M.; Simianer, H. ; Sharifi, A. R.   & Weigend, S.​ (2020) 
    Animals, 10(9) pp. 1480​.​ DOI: https://doi.org/10.3390/ani10091480 
    ​Details  DOI 
  • 2020 | Journal Article | Erratum | 
    ​ ​Correction: Jansen, S., et al. Relationship between Bone Stability and Egg Production in Genetically Divergent Chicken Layer Lines. Animals 2020, 10, 850​
    Jansen, S.; Baulain, U.; Habig, C.; Weigend, A.; Halle, I.; Scholz, A. M. & Simianer, H.  et al.​ (2020) 
    Animals, 10(12) pp. 2355​.​ DOI: https://doi.org/10.3390/ani10122355 
    ​Details  DOI 
  • 2020 | Journal Article | Research Paper | 
    ​ ​Growth Performance of Local Chicken Breeds, a High-Performance Genotype and Their Crosses Fed with Regional Faba Beans to Replace Soy​
    Nolte, T.; Jansen, S.; Weigend, S.; Moerlein, D. ; Halle, I.; Link, W.   & Hummel, J.  et al.​ (2020) 
    Animals, 10(4) pp. 702​.​ DOI: https://doi.org/10.3390/ani10040702 
    ​Details  DOI 
  • 2019 | Journal Article
    ​ ​HaploBlocker: Creation of Subgroup-Specific Haplotype Blocks and Libraries​
    Pook, T.; Schlather, M.; de los Campos, G.; Mayer, M.; Schoen, C. C. & Simianer, H. ​ (2019) 
    Genetics, 212(4) pp. 1045​-1061​.​ DOI: https://doi.org/10.1534/genetics.119.302283 
    ​Details  DOI 
  • 2019 | Journal Article | 
    ​ ​The SYNBREED chicken diversity panel: a global resource to assess chicken diversity at high genomic resolution​
    Malomane, D. K.; Simianer, H. ; Weigend, A.; Reimer, C.; Schmitt, A. O.   & Weigend, S.​ (2019) 
    BMC Genomics, 20(1) art. 345​.​ DOI: https://doi.org/10.1186/s12864-019-5727-9 
    ​Details  DOI  PMID  PMC 
  • 2019 | Journal Article | 
    ​ ​Genetic mechanism underlying sexual plasticity and its association with colour patterning in zebrafish (Danio rerio)​
    Hosseini, S. ; Ngoc-Thuy Ha, N. Ngoc-Thuy Ha, Ngoc-Thuy Ha; Simianer, H. ; Falker-Gieske, C.; Brenig, B. B. ; Franke, A. & Hörstgen-Schwark, G. et al.​ (2019) 
    BMC Genomics, 20(1) art. 341​.​ DOI: https://doi.org/10.1186/s12864-019-5722-1 
    ​Details  DOI  PMID  PMC 
  • 2019 | Journal Article | 
    ​ ​Phasing quality assessment in a brown layer population through family- and population-based software​
    Frioni, N.; Cavero, D.; Simianer, H.   & Erbe, M.​ (2019) 
    BMC Genetics, 20(1) pp. 57​.​ DOI: https://doi.org/10.1186/s12863-019-0759-3 
    ​Details  DOI  PMID  PMC 
  • 2018 | Journal Article
    ​ ​Of Cows and Cars​
    Simianer, H. ​ (2018) 
    Journal of Animal Breeding and Genetics, 135(4) pp. 249​-250​.​ DOI: https://doi.org/10.1111/jbg.12344 
    ​Details  DOI 
  • 2018 | Journal Article
    ​ ​A Simple Test Identifies Selection on Complex Traits​
    Beissinger, T. ; Kruppa, J.; Cavero, D.; Ha, N.-T.; Erbe, M. & Simianer, H. ​ (2018) 
    Genetics, 209(1) pp. 321​-333​.​ DOI: https://doi.org/10.1534/genetics.118.300857 
    ​Details  DOI 
  • 2018 | Journal Article
    ​ ​Phenotypic and genetic relationships between age at first calving, its component traits, and survival of heifers up to second calving​
    Heise, J.; Stock, K. F.; Reinhardt, F.; Ha, N.-T. & Simianer, H. ​ (2018) 
    Journal of Dairy Science, 101(1) pp. 425​-432​.​ DOI: https://doi.org/10.3168/jds.2017-12957 
    ​Details  DOI 
  • 2018 | Journal Article | 
    ​ ​Genome-wide scan reveals population stratification and footprints of recent selection in Nelore cattle​
    Cardoso, D. F.; de Albuquerque, L. G.; Reimer, C.; Qanbari, S.; Erbe, M.; do Nascimento, A. V. & Venturini, G. C. et al.​ (2018) 
    Genetics Selection Evolution, 50(1).​ DOI: https://doi.org/10.1186/s12711-018-0381-2 
    ​Details  DOI 
  • 2017 | Journal Article
    ​ ​Assessing the degree of stratification between closely related Holstein-Friesian populations​
    Szyda, J.; Suchocki, T.; Qanbari, S.; Liu, Z. & Simianer, H. ​ (2017) 
    Journal of Applied Genetics, 58(4) pp. 521​-526​.​ DOI: https://doi.org/10.1007/s13353-017-0409-2 
    ​Details  DOI 
  • 2017 | Journal Article
    ​ ​Accuracy of genomic breeding values revisited: Assessment of two established approaches and a novel one to determine the accuracy in two-step genomic prediction​
    Ni, G.; Kipp, S.; Simianer, H.   & Erbe, M.​ (2017) 
    Journal of Animal Breeding and Genetics, 134(3) pp. 242​-255​.​ DOI: https://doi.org/10.1111/jbg.12273 
    ​Details  DOI 
  • 2017 | Journal Article
    ​ ​Incorporating Gene Annotation into Genomic Prediction of Complex Phenotypes​
    Gao, N.; Martini, J. W. R.; Zhang, Z.; Yuan, X.; Zhang, H.; Simianer, H.   & Li, J.​ (2017) 
    Genetics, pp. genetics.300198.2017​.​ DOI: https://doi.org/10.1534/genetics.117.300198 
    ​Details  DOI 
  • 2017 | Journal Article
    ​ ​Liver transcriptome analysis reveals important factors involved in the metabolic adaptation of the transition cow​
    Ha, N.-T.; Drögemüller, C.; Reimer, C. ; Schmitz-Hsu, F.; Bruckmaier, R.; Simianer, H.   & Gross, J.​ (2017) 
    Journal of Dairy Science, 100(11) pp. 9311​-9323​.​ DOI: https://doi.org/10.3168/jds.2016-12454 
    ​Details  DOI 
  • 2017 | Journal Article
    ​ ​Empirical comparison between different methods for genomic prediction of number of piglets born alive in moderate sized breeding populations1​
    Fangmann, A.; Sharifi, R. A.; Heinkel, J.; Danowski, K.; Schrade, H.; Erbe, M. & Simianer, H. ​ (2017) 
    Journal of Animal Science, 95(4) pp. 1434​-1443​.​ DOI: https://doi.org/10.2527/jas.2016.0991 
    ​Details  DOI  PMID  PMC  WoS 
  • 2016 | Lecture
    ​ ​Genomische und andere Revolutionen in der Tierzucht​
    Simianer, H. ​ (2016)
    Landwirtschaft zwischen Idylle und Hightech; 2016-04-26​, Göttingen.
    ​Details 
  • 2016 | Journal Article
    ​ ​Genomic and other revolutions—why some technologies are quickly adopted and others are not​
    Simianer, H. ​ (2016) 
    Animal frontiers, 6(1) pp. 53​-58​.​ DOI: https://doi.org/10.2527/af.2016-0008 
    ​Details  DOI 
  • 2016 | Journal Article
    ​ ​From the Editors: Animal breeding in the genomics era​
    Ibanez-Escriche, N. & Simianer, H. ​ (2016) 
    Animal frontiers, 6(1) pp. 4​-5​.​ DOI: https://doi.org/10.2527/af.2016-0001 
    ​Details  DOI 
  • 2009 | Journal Article
    ​ ​Analysis of Relationship between Bovine Lymphocyte Antigen DRB3.2 Alleles, Somatic Cell Count and milk Traits in Iranian Holstein Population​
    Pashmi, M.; Qanbari, S.; Ghorashi, S. A.; Sharifi, A. R.   & Simianer, H. ​ (2009) 
    Journal of Animal Breeding and Genetics, 126(4) pp. 296​-303​.​ DOI: https://doi.org/10.1111/j.1439-0388.2008.00783.x 
    ​Details  DOI  PMID  PMC  WoS 

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