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Soil bacterial community structures in relation to different oil palm management practices

dc.contributor.authorBerkelmann, Dirk
dc.contributor.authorSchneider, Dominik
dc.contributor.authorHennings, Nina
dc.contributor.authorMeryandini, Anja
dc.contributor.authorDaniel, Rolf
dc.date.accessioned2021-05-18T09:55:43Z
dc.date.available2021-05-18T09:55:43Z
dc.date.issued2020de
dc.identifier.urihttp://resolver.sub.uni-goettingen.de/purl?gs-1/17811
dc.description.abstractWe provide soil bacterial 16 S rRNA gene amplicon and geochemical data derived from an oil palm plantation management experiment. The experimental design covered two different intensities of fertilizer application and weeding practices. We sampled the topsoil of 80 plots in total and extracted DNA and RNA. 16 S rRNA gene-derived and transcript-derived amplicons were generated and sequenced to analyse community composition and beta-diversity. One year after establishing the experiment, statistically significant differences of bacterial diversity or community composition between different treatments at entire (DNA-derived) and active (RNA-derived) community level were not detected. The dominant taxa belonged to Acidobacteriota and Actinobacteriota and were more abundant in the active community compared to the entire community. Similarly, the abundant genera Candidatus Solibacter and Haliangium were more abundant at active community level. Furthermore, clustering corresponding to the different sampling site locations was detected. Beta-diversity did not change among the treatments at DNA and RNA level. This dataset is of interest for related studies on the effect of altered management practices on soilborne communities.de
dc.description.sponsorshipOpen-Access-Publikationsfonds 2020
dc.language.isoengde
dc.rightsopenAccess
dc.rightsNamensnennung 4.0 International*
dc.rights.urihttp://creativecommons.org/licenses/by/4.0/*
dc.subject.ddc570
dc.titleSoil bacterial community structures in relation to different oil palm management practicesde
dc.typejournalArticlede
dc.identifier.doi10.1038/s41597-020-00752-3
dc.type.versionpublishedVersionde
dc.relation.eISSN2052-4463
dc.bibliographicCitation.volume7de
dc.bibliographicCitation.issue1de
dc.type.subtypejournalArticle
dc.description.statuspeerReviewedde
dc.bibliographicCitation.journalScientific Datade


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