Author Oefner, Peter J.

• 2015 | Journal Article | 
  ​ ​Ferritin-Mediated Iron Sequestration Stabilizes Hypoxia-Inducible Factor-1 alpha upon LPS Activation in the Presence of Ample Oxygen​
  Siegert, I.; Schoedel, J.; Nairz, M.; Schatz, V.; Dettmer, K.; Dick, C. & Kalucka, J. et al.​ (2015) 
  Cell Reports, 13(10) pp. 2048​-2055​.​ DOI: https://doi.org/10.1016/j.celrep.2015.11.005 
  ​Details  DOI  PMID  PMC  WoS 

• 2017 | Journal Article
  ​ ​Comprehensive Metaboproteomics of Burkitt's and Diffuse Large B-Cell Lymphoma Cell Lines and Primary Tumor Tissues Reveals Distinct Differences in Pyruvate Content and Metabolism​
  Schwarzfischer, P.; Reinders, J.; Dettmer, K.; Kleo, K.; Dimitrova, L.; Hummel, M. & Feist, M. et al.​ (2017) 
  Journal of Proteome Research, 16(3) pp. 1105​-+​.​ DOI: https://doi.org/10.1021/acs.jproteome.6b00164 
  ​Details  DOI  PMID  PMC  WoS 

• 2017 | Journal Article | Research Paper
  ​ ​Scale-Invariant Biomarker Discovery in Urine and Plasma Metabolite Fingerprints​
  Zacharias, H. U.; Rehberg, T.; Mehrl, S.; Richtmann, D.; Wettig, T.; Oefner, P. J. & Spang, R. et al.​ (2017) 
  Journal of Proteome Research, 16(10) pp. 3596​-3605​.​ DOI: https://doi.org/10.1021/acs.jproteome.7b00325 
  ​Details  DOI  PMID  PMC  arXiv 

• 2018 | Conference Paper
  ​ ​Loss-Function Learning for Digital Tissue Deconvolution​
  Görtler, F.; Solbrig, S.; Wettig, T.; Oefner, P. J.; Spang, R. & Altenbuchinger, M. ​ (2018)
  In:Raphael, Benjamin J.​ (Ed.), ​Research in Computational Molecular Biology pp. 75​-89. ​22nd Annual International Conference, RECOMB 2018​, Paris.
  Springer. DOI: https://doi.org/10.1007/978-3-319-89929-9_5 
  ​Details  DOI 

• 2018 | Journal Article | Research Paper
  ​ ​Principles of Systems Biology, No. 31​
  Cho, H.; Berger, B.; Peng, J.; Galitzine, C.; Vitek, O.; Beltran, P. M. J. & Cristea, I. M. et al.​ (2018) 
  Cell Systems, 7(2) pp. 133​-135​.​ DOI: https://doi.org/10.1016/j.cels.2018.08.005 
  ​Details  DOI  PMID  PMC 

• 2018 | Journal Article | 
  ​ ​Cooperative STAT/NF-κB signaling regulates lymphoma metabolic reprogramming and aberrant GOT2 expression.​
  Feist, M.; Schwarzfischer, P.; Heinrich, P.; Sun, X.; Kemper, J.; von Bonin, F. & Perez-Rubio, P. et al.​ (2018) 
  Nature communications, 9(1) art. 1514​.​ DOI: https://doi.org/10.1038/s41467-018-03803-x 
  ​Details  DOI  PMID  PMC 

• 2019 | Journal Article | Research Paper | 
  ​ ​A multi-source data integration approach reveals novel associations between metabolites and renal outcomes in the German Chronic Kidney Disease study​
  Altenbuchinger, M. ; Zacharias, H. U.; Solbrig, S.; Schäfer, A.; Büyüközkan, M.; Schultheiß, U. T. & Kotsis, F. et al.​ (2019) 
  Scientific Reports, 9(1) art. 13954​.​ DOI: https://doi.org/10.1038/s41598-019-50346-2 
  ​Details  DOI  PMID  PMC 

• 2019 | Journal Article | Research Paper
  ​ ​A Novel Metabolic Signature To Predict the Requirement of Dialysis or Renal Transplantation in Patients with Chronic Kidney Disease​
  Zacharias, H. U.; Altenbuchinger, M. ; Schultheiss, U. T.; Samol, C.; Kotsis, F.; Poguntke, I. & Sekula, P. et al.​ (2019) 
  Journal of Proteome Research, 18(4) pp. 1796​-1805​.​ DOI: https://doi.org/10.1021/acs.jproteome.8b00983 
  ​Details  DOI  PMID  PMC 

• 2020 | Journal Article | 
  ​ ​High CD206 levels in Hodgkin lymphoma‐educated macrophages are linked to matrix‐remodeling and lymphoma dissemination​
  Arlt, A. ; Bonin, F. ; Rehberg, T.; Perez‐Rubio, P.; Engelmann, J. C.; Limm, K. & Reinke, S. et al.​ (2020) 
  Molecular Oncology, 14(3) pp. 571​-589​.​ DOI: https://doi.org/10.1002/1878-0261.12616 
  ​Details  DOI 

• 2020 | Journal Article | Research Paper
  ​ ​DTD: An R Package for Digital Tissue Deconvolution​
  Schön, M.; Simeth, J.; Heinrich, P.; Görtler, F.; Solbrig, S.; Wettig, T. & Oefner, P. J. et al.​ (2020) 
  Journal of Computational Biology, 27(3) pp. 386​-389​.​ DOI: https://doi.org/10.1089/cmb.2019.0469 
  ​Details  DOI  PMID  PMC 

• 2020 | Journal Article | 
  ​ ​LEF1 supports metastatic brain colonization by regulating glutathione metabolism and increasing ROS resistance in breast cancer​
  Blazquez, R.; Rietkötter, E.; Wenske, B.; Wlochowitz, D.; Sparrer, D.; Vollmer, E. & Müller, G. et al.​ (2020) 
  International Journal of Cancer, 146(11) pp. 3170​-3183​.​ DOI: https://doi.org/10.1002/ijc.32742 
  ​Details  DOI  PMID  PMC 

• 2020 | Journal Article | Research Paper | 
  ​ ​Platform independent protein-based cell-of-origin subtyping of diffuse large B-cell lymphoma in formalin-fixed paraffin-embedded tissue​
  Reinders, J.; Altenbuchinger, M. ; Limm, K.; Schwarzfischer, P.; Scheidt, T.; Strasser, L. & Richter, J. et al.​ (2020) 
  Scientific Reports, 10(1) pp. 7876​.​ DOI: https://doi.org/10.1038/s41598-020-64212-z 
  ​Details  DOI  PMID  PMC 

• 2021 | Journal Article | 
  ​ ​An R-Package for the Deconvolution and Integration of 1D NMR Data: MetaboDecon1D​
  Häckl, M.; Tauber, P.; Schweda, F.; Zacharias, H. U.; Oefner, P. J.; Gronwald, W. & Altenbuchinger, M.​ (2021) 
  Metabolites, 11(7) pp. 452​.​ DOI: https://doi.org/10.3390/metabo11070452 
  ​Details  DOI 

• 2022 | Journal Article | 
  ​ ​Bucket Fuser: Statistical Signal Extraction for 1D 1H NMR Metabolomic Data​
  Altenbuchinger, M. ; Berndt, H.; Kosch, R.; Lang, I.; Dönitz, J. ; Oefner, P. J. & Gronwald, W. et al.​ (2022) 
  Metabolites, 12(9) pp. 812​.​ DOI: https://doi.org/10.3390/metabo12090812 
  ​Details  DOI 

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