Author Kohlbacher, Oliver

• 2014 | Journal Article
  ​ ​Photo-cross-linking and high-resolution mass spectrometry for assignment of RNA-binding sites in RNA-binding proteins​
  Kramer, K.; Sachsenberg, T.; Beckmann, B. M.; Qamar, S.; Boon, K.-L.; Hentze, M. W. & Kohlbacher, O. et al.​ (2014) 
  Nature Methods, 11(10) pp. 1064​-1070​.​ DOI: https://doi.org/10.1038/NMETH.3092 
  ​Details  DOI  PMID  PMC  WoS 

• 2015 | Journal Article
  ​ ​Dithiothreitol (DTT) Acts as a Specific, UV-inducible Cross-linker in Elucidation of Protein-RNA Interactions​
  Zaman, U.; Richter, F. M.; Hofele, R. V.; Kramer, K.; Sachsenberg, T.; Kohlbacher, O. & Lenz, C. et al.​ (2015) 
  Molecular & Cellular Proteomics, 14(12) pp. 3196​-3210​.​ DOI: https://doi.org/10.1074/mcp.M115.052795 
  ​Details  DOI  PMID  PMC  WoS 

• 2015 | Journal Article
  ​ ​Analysis of protein-RNA interactions in CRISPR proteins and effector complexes by UV-induced cross-linking and mass spectrometry​
  Sharma, K.; Hrle, A.; Kramer, K.; Sachsenberg, T.; Staals, R. H. J.; Randau, L. & Marchfelder, A. et al.​ (2015) 
  Methods, 89 pp. 138​-148​.​ DOI: https://doi.org/10.1016/j.ymeth.2015.06.005 
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• 2016 | Journal Article
  ​ ​LFQProfiler and RNPxl: Open-Source Tools for Label-Free Quantification and Protein-RNA Cross-Linking Integrated into Proteome Discoverer​
  Veit, J.; Sachsenberg, T.; Chernev, A.; Aicheler, F.; Urlaub, H. & Kohlbacher, O.​ (2016) 
  Journal of Proteome Research, 15(9) pp. 3441​-3448​.​ DOI: https://doi.org/10.1021/acs.jproteome.6b00407 
  ​Details  DOI  PMID  PMC  WoS 

• 2018 | Journal Article | 
  ​ ​Whither systems medicine?​
  Apweiler, R.; Beißbarth, T. ; Berthold, M. R.; Blüthgen, N.; Burmeister, Y.; Dammann, O. & Deutsch, A. et al.​ (2018) 
  Experimental & Molecular Medicine, 50(3) art. e453​.​ DOI: https://doi.org/10.1038/emm.2017.290 
  ​Details  DOI  PMID  PMC 

• 2020 | Journal Article
  ​ ​OpenPepXL: An Open-Source Tool for Sensitive Identification of Cross-Linked Peptides in XL-MS​
  Netz, E.; Dijkstra, T. M.; Sachsenberg, T.; Zimmermann, L.; Walzer, M.; Monecke, T.   & Ficner, R.  et al.​ (2020) 
  Molecular & Cellular Proteomics, 19(12) pp. 2157​-2168​.​ DOI: https://doi.org/10.1074/mcp.TIR120.002186 
  ​Details  DOI 

• 2020 | Journal Article | 
  ​ ​Analysis of protein-DNA interactions in chromatin by UV induced cross-linking and mass spectrometry​
  Stützer, A.; Welp, L. M.; Raabe, M.; Sachsenberg, T.; Kappert, C.; Wulf, A. & Lau, A. M. et al.​ (2020) 
  Nature Communications, 11(1).​ DOI: https://doi.org/10.1038/s41467-020-19047-7 
  ​Details  DOI 

• 2021 | Journal Article | Research Paper | 
  ​ ​Machine learning identifies ICU outcome predictors in a multicenter COVID-19 cohort​
  Magunia, H.; Lederer, S.; Verbuecheln, R.; Gilot, B. J.; Koeppen, M.; Haeberle, H. A. & Mirakaj, V. et al.​ (2021) 
  Critical Care, 25(1) art. 295​.​ DOI: https://doi.org/10.1186/s13054-021-03720-4 
  ​Details  DOI 

• 2022 | Book Chapter
  ​ ​The COVID-19 Data Exchange Platform of the German University Medicine​
  Prokosch, H.-U.; Bahls, T.; Bialke, M.; Eils, J.; Fegeler, C.; Gruendner, J.& Haarbrandt, B. et al.​ (2022)
  In:​Séroussi, Brigitte; Weber, Patrick; Dhombres, Ferdinand; Grouin, Cyril; Liebe, Jan-David; Pelayo, Sylvia; Pinna, Andrea, et al.​ (Eds.), Challenges of Trustable AI and Added-Value on Health : Proceedings of MIE 2022. ​IOS Press. DOI: https://doi.org/10.3233/SHTI220554 
  ​Details  DOI 

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