Author Dencker, Thomas
-
2018 | Journal Article
Accurate multiple alignment of distantly related genome sequences using filtered spaced word matches as anchor points
Leimeister, C.-A.; Dencker, T. & Morgenstern, B. (2018)
Bioinformatics, 35(2) pp. 211-218. DOI: https://doi.org/10.1093/bioinformatics/bty592
Details DOI
-
2018 | Book Chapter
Multi-SpaM: A Maximum-Likelihood Approach to Phylogeny Reconstruction Using Multiple Spaced-Word Matches and Quartet Trees
Dencker, T.; Leimeister, C.-A.; Gerth, M.; Bleidorn, C.; Snir, S.& Morgenstern, B. (2018)
In:Blanchette, Mathieu; Ouangraoua, Aïda (Eds.), Comparative Genomics : 16th International Conference, RECOMB-CG 2018, Magog-Orford, QC, Canada, October 9-12, 2018, Proceedings pp. 227-241. Cham: Springer International Publishing. DOI: https://doi.org/10.1007/978-3-030-00834-5_13
Details DOI
-
2019 | Journal Article |
Benchmarking of alignment-free sequence comparison methods
Zielezinski, A.; Girgis, H. Z.; Bernard, G.; Leimeister, C.-A.; Tang, K.; Dencker, T. & Lau, A. K. et al. (2019)
Genome Biology, 20(1). DOI: https://doi.org/10.1186/s13059-019-1755-7
Details DOI
-
2019 | Journal Article
‘Multi-SpaM’: a maximum-likelihood approach to phylogeny reconstruction using multiple spaced-word matches and quartet trees
Dencker, T.; Leimeister, C.-A.; Gerth, M.; Bleidorn, C.; Snir, S. & Morgenstern, B. (2019)
NAR Genomics and Bioinformatics, 2(1) art. lqz013. DOI: https://doi.org/10.1093/nargab/lqz013
Details DOI
-
2020 | Journal Article |
The number of k-mer matches between two DNA sequences as a function of k and applications to estimate phylogenetic distances
Röhling, S.; Linne, A.; Schellhorn, J. ; Hosseini, M.; Dencker, T. & Morgenstern, B. (2020)
PLoS One, 15(2) pp. e0228070. DOI: https://doi.org/10.1371/journal.pone.0228070
Details DOI