Author Azevedo, Vasco

1 to 32 of 32 Items
  • 2014 | Journal Article | Research Paper
    ​ ​On the limits of computational functional genomics for bacterial lifestyle prediction​
    Barbosa, E.; Röttger, R.; Hauschild, A.-C. ; Azevedo, V. & Baumbach, J.​ (2014) 
    Briefings in Functional Genomics, 13(5) pp. 398​-408​.​ DOI: https://doi.org/10.1093/bfgp/elu014 
    ​Details  DOI  PMID  PMC 
  • 2017 | Journal Article | Research Paper
    ​ ​LifeStyle-Specific-Islands (LiSSI): Integrated Bioinformatics Platform for Genomic Island Analysis​
    Barbosa, E.; Röttger, R.; Hauschild, A.-C. ; de Castro Soares, S.; Böcker, S.; Azevedo, V. & Baumbach, J.​ (2017) 
    Journal of Integrative Bioinformatics, 14(2).​ DOI: https://doi.org/10.1515/jib-2017-0010 
    ​Details  DOI  PMID  PMC 
  • 2019 | Journal Article | 
    ​ ​Re-sequencing and optical mapping reveals misassemblies and real inversions on Corynebacterium pseudotuberculosis genomes​
    Sousa, T. de J.; Parise, D.; Profeta, R.; Parise, M. T. D.; Gomide, A. C. P.; Kato, R. B. & Pereira, F. L. et al.​ (2019) 
    Scientific Reports, 9(1).​ DOI: https://doi.org/10.1038/s41598-019-52695-4 
    ​Details  DOI 
  • 2020 | Journal Article
    ​ ​Complete genome analysis of Glutamicibacter creatinolyticus from mare abscess and comparative genomics provide insight of diversity and adaptation for Glutamicibacter​
    Santos, R. G.; Hurtado, R.; Gomes, L. G. R.; Profeta, R.; Rifici, C.; Attili, A. R. & Spier, S. J. et al.​ (2020) 
    Gene, 741 pp. 144566​.​ DOI: https://doi.org/10.1016/j.gene.2020.144566 
    ​Details  DOI 
  • 2020 | Journal Article
    ​ ​Exploring the contribution of fructophilic lactic acid bacteria to cocoa beans fermentation: Isolation, selection and evaluation​
    Viesser, J. A.; de Melo Pereira, G. V.; de Carvalho Neto, D. P.; Vandenberghe, L. P. de S.; Azevedo, V.; Brenig, B.   & Rogez, H. et al.​ (2020) 
    Food Research International, 136 pp. 109478​.​ DOI: https://doi.org/10.1016/j.foodres.2020.109478 
    ​Details  DOI 
  • 2020 | Journal Article
    ​ ​Whole-genome sequencing reveals misidentification of a multidrug-resistant urine clinical isolate as Corynebacterium urealyticum​
    Rocha, D. J.; Azevedo, V.; Brenig, B. ; Silva, A.; Blom, J.; Ramos, R. T. & Aguiar, E. R. et al.​ (2020) 
    Journal of Global Antimicrobial Resistance, 23 pp. 16​-19​.​ DOI: https://doi.org/10.1016/j.jgar.2020.07.020 
    ​Details  DOI 
  • 2021 | Journal Article
    ​ ​Co-culturing fructophilic lactic acid bacteria and yeast enhanced sugar metabolism and aroma formation during cocoa beans fermentation​
    Viesser, J. A.; de Melo Pereira, G. V.; de Carvalho Neto, D. P.; Rogez, H.; Góes-Neto, A.; Azevedo, V. & Brenig, B.  et al.​ (2021) 
    International Journal of Food Microbiology, 339 art. S0168160520305092​.​ DOI: https://doi.org/10.1016/j.ijfoodmicro.2020.109015 
    ​Details  DOI 
  • 2021 | Journal Article
    ​ ​Bacterial Cellulose Retains Robustness but Its Synthesis Declines After Exposure to a Mars-Like Environment Simulated Outside the International Space Station​
    Orlovska, I.; Podolich, O.; Kukharenko, O.; Zaets, I.; Reva, O.; Khirunenko, L. & Zmejkoski, D. et al.​ (2021) 
    Astrobiology,.​ DOI: https://doi.org/10.1089/ast.2020.2332 
    ​Details  DOI 
  • 2021 | Journal Article
    ​ ​Comparative genomics with a multidrug-resistant Klebsiella pneumoniae isolate reveals the panorama of unexplored diversity in Northeast Brazil​
    Profeta, R.; Seyffert, N.; Tiwari, S.; Viana, M. V.; Jaiswal, A. K.; Caetano, A. C. & Bücker, D. H. et al.​ (2021) 
    Gene, 772 pp. 145386​.​ DOI: https://doi.org/10.1016/j.gene.2020.145386 
    ​Details  DOI 
  • 2021 | Journal Article
    ​ ​Shotgun metagenomic analysis of kombucha mutualistic community exposed to Mars‐like environment outside the International Space Station​
    Góes‐Neto, A.; Kukharenko, O.; Orlovska, I.; Podolich, O.; Imchen, M.; Kumavath, R. & Kato, R. B. et al.​ (2021) 
    Environmental Microbiology,.​ DOI: https://doi.org/10.1111/1462-2920.15405 
    ​Details  DOI 
  • 2021 | Journal Article
    ​ ​Safety Evaluation of Lactobacillus delbrueckii subsp. lactis CIDCA 133: a Health-Promoting Bacteria​
    de Jesus, L. C. L.; de Jesus Sousa, T.; Coelho-Rocha, N. D.; Profeta, R.; Barroso, F. A. L.; Drumond, M. M. & Mancha-Agresti, P. et al.​ (2021) 
    Probiotics and Antimicrobial Proteins,.​ DOI: https://doi.org/10.1007/s12602-021-09826-z 
    ​Details  DOI 
  • 2021 | Journal Article
    ​ ​Characterization of the first vaginal Lactobacillus crispatus genomes isolated in Brazil​
    Oliveira de Almeida, M.; Carvalho, R.; Figueira Aburjaile, F.; Malcher Miranda, F.; Canário Cerqueira, J.; Brenig, B.   & Ghosh, P. et al.​ (2021) 
    PeerJ, 9 pp. e11079​.​ DOI: https://doi.org/10.7717/peerj.11079 
    ​Details  DOI 
  • 2021 | Journal Article | 
    ​ ​Genomic Characterization of Multidrug-Resistant Escherichia coli BH100 Sub-strains​
    Carvalho, R.; Aburjaile, F.; Canario, M.; Nascimento, A. M. A.; Chartone-Souza, E.; de Jesus, L. & Zamyatnin, A. A. et al.​ (2021) 
    Frontiers in Microbiology, 11.​ DOI: https://doi.org/10.3389/fmicb.2020.549254 
    ​Details  DOI 
  • 2021 | Journal Article | 
    ​ ​Probiogenomics of Lactobacillus delbrueckii subsp. lactis CIDCA 133: In Silico, In Vitro, and In Vivo Approaches​
    de Jesus, L. C. L.; Drumond, M. M.; Aburjaile, F. F.; Sousa, T. de J.; Coelho-Rocha, N. D.; Profeta, R. & Brenig, B. et al.​ (2021) 
    Microorganisms, 9(4) pp. 829​.​ DOI: https://doi.org/10.3390/microorganisms9040829 
    ​Details  DOI 
  • 2021 | Journal Article
    ​ ​Metagenome-Assembled Genome Sequences Obtained from a Reactivated Kombucha Microbial Community Exposed to a Mars-Like Environment outside the International Space Station​
    Lee, I.; Barh, D.; Podolich, O.; Brenig, B.; Tiwari, S.; Azevedo, V. & Góes-Neto, A. et al.​ (2021) 
    Microbiology Resource Announcements, 10(36) art. e00549-21​.​ DOI: https://doi.org/10.1128/MRA.00549-21 
    ​Details  DOI 
  • 2022 | Journal Article
    ​ ​Genome Report of Emergent Fish Pathogen Edwardsiella piscicida Recovered from Pseudoplatystoma corruscans in Brazil​
    Ferrari, N. A.; Takashe, J. V. G.; Aburjaile, F. F.; Azevedo, V.; da Costa, M. M.; Brenig, B. & Rocha, F. E. P. et al.​ (2022) 
    Microbiology Resource Announcements, art. e00796-22​.​ DOI: https://doi.org/10.1128/mra.00796-22 
    ​Details  DOI 
  • 2022 | Journal Article | Research Paper | 
    ​ ​Bacteriocin Producing Streptococcus agalactiae Strains Isolated from Bovine Mastitis in Brazil​
    Vidal Amaral, J. R.; Jucá Ramos, R. T.; Almeida Araújo, F.; Bentes Kato, R.; Figueira Aburjaile, F.; de Castro Soares, S. & Góes-Neto, A. et al.​ (2022) 
    Microorganisms, 10(3) pp. 588​.​ DOI: https://doi.org/10.3390/microorganisms10030588 
    ​Details  DOI 
  • 2022 | Journal Article | 
    ​ ​Metagenome-Assembled Genomes of Komagataeibacter from Kombucha Exposed to Mars-Like Conditions Reveal the Secrets in Tolerating Extraterrestrial Stresses​
    Lee, I.; Podolich, O.; Brenig, B. ; Tiwari, S.; Azevedo, V.; de Carvalho, D. S. & Uetanabaro, A. P. T. et al.​ (2022) 
    Journal of Microbiology and Biotechnology, 32(8) pp. 967​-975​.​ DOI: https://doi.org/10.4014/jmb.2204.04009 
    ​Details  DOI 
  • 2022 | Journal Article
    ​ ​Comparative genomic analysis of the Dietzia genus: an insight into genomic diversity, and adaptation​
    Gonçalves dos Santos, R.; Castillo, R. H.; Neres Rodrigues, D. L.; Lima, A.; Ferreira dos Anjos, W.; Rifici, C. & Attili, A. R. et al.​ (2022) 
    Research in Microbiology, art. 103998​.​ DOI: https://doi.org/10.1016/j.resmic.2022.103998 
    ​Details  DOI 
  • 2022 | Journal Article | Research Paper | 
    ​ ​Comparative Genomics and In Silico Evaluation of Genes Related to the Probiotic Potential of Bifidobacterium breve 1101A​
    Valdez-Baez, J.; da Costa, F. M. R.; Pinto Gomide, A. C.; Profeta, R.; da Silva, A. L.; Sousa, T. de J. & Viana, M. V. C. et al.​ (2022) 
    Bacteria, 1(3) pp. 161​-182​.​ DOI: https://doi.org/10.3390/bacteria1030013 
    ​Details  DOI 
  • 2022 | Journal Article | 
    ​ ​Pan-genomic analysis of Corynebacterium amycolatum gives insights into molecular mechanisms underpinning the transition to a pathogenic phenotype​
    Jesus, H. N. R.; Rocha, D. J. P. G.; Ramos, R. T. J.; Silva, A.; Brenig, B. ; Góes-Neto, A. & Costa, M. M. et al.​ (2022) 
    Frontiers in Microbiology, 13.​ DOI: https://doi.org/10.3389/fmicb.2022.1011578 
    ​Details  DOI 
  • 2023 | Journal Article
    ​ ​Comparative genomic analysis of ovine and other host associated isolates of Staphylococcus aureus exhibit the important role of mobile genetic elements and virulence factors in host adaptation​
    Lima, A.; Carolina Barbosa Caetano, A.; Hurtado Castillo, R.; Gonçalves dos Santos, R.; Lucas Neres Rodrigues, D.; de Jesus Sousa, T. & Kato, R. B. et al.​ (2023) 
    Gene, 855 art. 147131​.​ DOI: https://doi.org/10.1016/j.gene.2022.147131 
    ​Details  DOI 
  • 2023 | Journal Article
    ​ ​Burkholderia semiarida sp. nov. and Burkholderia sola sp. nov., two novel B. cepacia complex species causing onion sour skin​
    Velez, L. S.; Aburjaile, F. F.; Farias, A. R.; Baia, A. D.; Oliveira, W. J.; Silva, A. M. & Benko-Iseppon, A. M. et al.​ (2023) 
    Systematic and Applied Microbiology, 46(3) art. 126415​.​ DOI: https://doi.org/10.1016/j.syapm.2023.126415 
    ​Details  DOI 
  • 2023 | Journal Article
    ​ ​The Genomic Approach of Antimicrobial Resistance of Salmonella Typhimurium isolates from Guinea Pigs in Lima, Peru​
    Hurtado, R.; Barh, D.; de Jesus, L. C. L.; Canário Viana, M. V.; Tiwari, S.; Aburjaile, F. F. & Carhuaricra Huaman, D. E. et al.​ (2023) 
    Research in Microbiology, art. 104086​.​ DOI: https://doi.org/10.1016/j.resmic.2023.104086 
    ​Details  DOI 
  • 2023 | Journal Article
    ​ ​Environmental Biofilms from an Urban Community in Salvador, Brazil, Shelter Previously Uncharacterized Saprophytic Leptospira​
    dos Santos Ribeiro, P.; Carvalho, N. B.; Aburjaile, F.; Sousa, T.; Veríssimo, G.; Gomes, T. & Neves, F. et al.​ (2023) 
    Microbial Ecology,.​ DOI: https://doi.org/10.1007/s00248-023-02253-3 
    ​Details  DOI 
  • 2023 | Journal Article
    ​ ​Draft Genome Sequence of Seven Pigmented Strains of Xanthomonas citri pv. anacardii , the Causal Agent of Cashew Angular Spot​
    Lucena, L.; Benko-Iseppon, A.; Brenig, B.; Azevedo, V.; Aburjaile, F.; Souza, E. B. & Gama, M. A. S.​ (2023) 
    Phytopathology, art. PHYTO-08-22-0279-A​.​ DOI: https://doi.org/10.1094/PHYTO-08-22-0279-A 
    ​Details  DOI 
  • 2023 | Journal Article | 
    ​ ​Characterization and Association of Rips Repertoire to Host Range of Novel Ralstonia solanacearum Strains by In Silico Approaches​
    Ariute, J. C.; Felice, A. G.; Soares, S.; da Gama, M. A. S.; de Souza, E. B.; Azevedo, V. & Brenig, B. et al.​ (2023) 
    Microorganisms, 11(4) pp. 954​.​ DOI: https://doi.org/10.3390/microorganisms11040954 
    ​Details  DOI 
  • 2023 | Journal Article
    ​ ​Functional Swiss-type cheeses promote beneficial effects in mice gut microbiome during homeostasis and inflammation​
    Carvalho, R. D. de O.; Rabah, H.; Ariute, J. C.; Aburjaile, F. F.; Brenig, B.; Guédon, E. & Le Loir, Y. et al.​ (2023) 
    Food Bioscience, 56 art. 103327​.​ DOI: https://doi.org/10.1016/j.fbio.2023.103327 
    ​Details  DOI 
  • 2023 | Journal Article | 
    ​ ​Unraveling the Secrets of a Double-Life Fungus by Genomics: Ophiocordyceps australis CCMB661 Displays Molecular Machinery for Both Parasitic and Endophytic Lifestyles​
    de Menezes, T. A.; Aburjaile, F. F.; Quintanilha-Peixoto, G.; Tomé, L. M. R.; Fonseca, P. L. C.; Mendes-Pereira, T. & Araújo, D. S. et al.​ (2023) 
    Journal of Fungi, 9(1) pp. 110​.​ DOI: https://doi.org/10.3390/jof9010110 
    ​Details  DOI 
  • 2023 | Journal Article
    ​ ​Comprehensive probiogenomics analysis of the commensal Escherichia coli CEC15 as a potential probiotic strain​
    da Silva, T. F.; Glória, R. d. A.; de Sousa, T. J.; Americo, M. F.; Freitas, A. d. S.; Viana, M. V. C. & de Jesus, L. C. L. et al.​ (2023) 
    BMC Microbiology, 23(1) art. 364​.​ DOI: https://doi.org/10.1186/s12866-023-03112-4 
    ​Details  DOI 
  • 2024 | Journal Article
    ​ ​Identification of taxonomic changes in the fecal bacteriome associated with colorectal polyps and cancer: potential biomarkers for early diagnosis​
    Grion, B. A. R.; Fonseca, P. L. C.; Kato, R. B.; García, G. J. Y.; Vaz, A. B. M.; Jiménez, B. N. & Dambolenea, A. L. et al.​ (2024) 
    Frontiers in Microbiology, 14 art. 1292490​.​ DOI: https://doi.org/10.3389/fmicb.2023.1292490 
    ​Details  DOI 
  • 2024 | Journal Article
    ​ ​Resequencing and characterization of the first Corynebacterium pseudotuberculosis genome isolated from camel​
    Giovanelli Tacconi Gimenez, E.; Viana, M. V. C.; de Jesus Sousa, T.; Aburjaile, F.; Brenig, B.; Silva, A. & Azevedo, V.​ (2024) 
    PeerJ, 12 art. e16513​.​ DOI: https://doi.org/10.7717/peerj.16513 
    ​Details  DOI 

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